Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926153.1_cds_XP_016474226.1_66273
CDS Infomation

[gene=LOC107796026] [db_xref=GeneID:107796026] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like] [protein_id=XP_016474226.1] [location=complement(join(51800..52624,53483..53950))] [gbkey=CDS]
Sequence

ATGAATTTGATAAAAAAATCTCTATCCTCAATCCTAAAATCCATAGCCACCCAACAGTTT
GCATCCCATAGTCACAACCTTCAGCACCACAGAACCATAGTAAAAGTCCGTTTAAAATGG
GTGAAAAACAGAGGTTTGGACCACATAATCGATGTTCAAACGGATCTTAAAGCAGCTTGT
TTATTAAAAGAAGCTATTGTTCGTTCACCAGTTGGTTATCTAACTGCGAAGTCACTTGCT
GACTCACAAAAAATTCTTGGACTTACAGTTCCTACACTTAGGTTTATTAGAAGATACCCA
ACTCTTTTTGAAGAGTTTCCTCACCCAAAGTACCCATCTTTGCCTTGTTTTAAACTTACC
CATATTGCTAAAATTCTTCATGATCAAGAACTGAAGGTGTTTGATGATAACCACACTGAT
TTGGTTCAAAGGCTTTCCAAACTTCTTATGATGACAACTAACAGAATGGTTGCGCTGCAG
TCATTACATCCTTTGAAATGGGATTTAGGATTGCCCGATGATTTTGATAAGAATTTAATT
AGGAAATTTCCTGATCATTTTAGGATAGTTAAGGGAACGAATGGATTGGCTTGCTTAAAG
CTTGTTCAATGGCCAGAAGAATATGCTGTCTCCGAGTTGCAAAAGATGAATGAGAAGAGC
ACAATAGACGATGGAAGCCCTCCTGGGTATAGAGAATTTAAAAGGGGCAAAGCTGCATTA
GAATTTCCAATGAGTTTTCCAAGGGGATATGGGGCACAGAAGAAGGTCAAAGCGTGGATG
GATGAGTTTCAGAAGCTGCCTTACATCTCACCTTATGAGGATTCAAGGGGAATTGACCCC
GATAGTGATCTTATGGAAAAGAGAATAGTTGGGGTTTTACATGAGTTTCTAAGCTTGACA
CTATACAAGAAAACAAAGAGAAATTACTTGAGGAGCTTGAGAGAGGAACTAAATCTTCCA
CATAGATTTACTCGAATATTTACAAGGTATCCAGGAATATTTTACCTCTCATTGAAGTGC
AAAACAACGACTGTGGCGTTGAGAGAGGGGTACCGTCGTGGAAGACTTGTAAATCCGCAT
CCTCTGACTCGCCACAGGGATAAGTTTCATCATGTTATGAGGACTGGGTTAATTTATCGA
AGCAAAGGAATAGACATTTTGCCGCAACTAGACAATGTAGTTGATGAAGAGGATACGGGA
GAAGAAGAGAGTGATGAAGAAGAGATAGAAATGAATGATGAATGCTACGAAGATGGATCT
TCAGATGCAGACACAGGTGGTGATGAAGGCTAG

Peptide Sequence

PEP ID

XP_016474226.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Nicotiana tabacum]
Sequence

MNLIKKSLSSILKSIATQQFASHSHNLQHHRTIVKVRLKWVKNRGLDHIIDVQTDLKAAC
LLKEAIVRSPVGYLTAKSLADSQKILGLTVPTLRFIRRYPTLFEEFPHPKYPSLPCFKLT
HIAKILHDQELKVFDDNHTDLVQRLSKLLMMTTNRMVALQSLHPLKWDLGLPDDFDKNLI
RKFPDHFRIVKGTNGLACLKLVQWPEEYAVSELQKMNEKSTIDDGSPPGYREFKRGKAAL
EFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYEDSRGIDPDSDLMEKRIVGVLHEFLSLT
LYKKTKRNYLRSLREELNLPHRFTRIFTRYPGIFYLSLKCKTTTVALREGYRRGRLVNPH
PLTRHRDKFHHVMRTGLIYRSKGIDILPQLDNVVDEEDTGEEESDEEEIEMNDECYEDGS
SDADTGGDEG

Transcript Sequence

Gene sequence data has not been registered.